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ANKIB1 ankyrin repeat and IBR domain containing 1 [ Cervus elaphus (red deer) ]

Gene ID: 122674503, updated on 22-Mar-2024

Summary

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Gene symbol
ANKIB1
Gene description
ankyrin repeat and IBR domain containing 1
See related
EnsemblRapid:ENSCESG00005011744
Gene type
protein coding
RefSeq status
MODEL
Organism
Cervus elaphus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
23
Annotation release Status Assembly Chr Location
100 current mCerEla1.1 (GCF_910594005.1) 18 NC_057832.1 (19896669..20046767)

Chromosome 18 - NC_057832.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeats and death domain containing 1 Neighboring gene KRIT1 ankyrin repeat containing Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene speedy protein C-like Neighboring gene Y-box-binding protein 1-like Neighboring gene probable tubulin polyglutamylase TTLL1 Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene protein lifeguard 2-like Neighboring gene cytochrome b-c1 complex subunit 7-like Neighboring gene GATA zinc finger domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057832.1 Chromosome 18 Reference mCerEla1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and IBR domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cervus elaphus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCerEla1.1

Genomic

  1. NC_057832.1 Reference mCerEla1.1

    Range
    19896669..20046767
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043872898.1 → XP_043728833.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

    Related
    ENSCESP00005015464.1, ENSCEST00005018291.1
    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 199
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

  2. XM_043872899.1 → XP_043728834.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 199
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

  3. XM_043872897.1 → XP_043728832.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 199
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

  4. XM_043872902.1 → XP_043728837.1  ankyrin repeat and IBR domain-containing protein 1 isoform X2

    Related
    ENSCESP00005015469.1, ENSCEST00005018299.1
    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 199
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

  5. XM_043872901.1 → XP_043728836.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 199
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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