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ASCL3 achaete-scute family bHLH transcription factor 3 [ Lagopus leucura (white-tailed ptarmigan) ]

Gene ID: 122185923, updated on 22-Mar-2024

Summary

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Gene symbol
ASCL3
Gene description
achaete-scute family bHLH transcription factor 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagopus leucura
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current USGS_WTPT01 (GCF_019238085.1) Unplaced Scaffold NW_024962282.1 (2979018..2983022, complement)

NW_024962282.1Genomic Context describing neighboring genes Neighboring gene A-kinase interacting protein 1 Neighboring gene chromosome unknown C11orf16 homolog Neighboring gene TMEM9 domain family member B Neighboring gene nuclear receptor interacting protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024962282 Unplaced Scaffold Reference USGS_WTPT01

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
achaete-scute homolog 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagopus leucura Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USGS_WTPT01

Genomic

  1. NW_024962282.1 Reference USGS_WTPT01

    Range
    2979018..2983022 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042882137.1 → XP_042738071.1  achaete-scute homolog 3

    Conserved Domains (1) summary
    cd19745
    Location:95 → 153
    bHLH_TS_ASCL3; basic helix-loop-helix (bHLH) domain found in achaete-scute-like protein 3 (ASCL-3) and similar proteins

  2. XM_042882136.1 → XP_042738070.1  achaete-scute homolog 3

    Conserved Domains (1) summary
    cd19745
    Location:95 → 153
    bHLH_TS_ASCL3; basic helix-loop-helix (bHLH) domain found in achaete-scute-like protein 3 (ASCL-3) and similar proteins
Nucleotide Protein
Heading Accession and Version

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