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LOC121232360 secreted RxLR effector protein 161-like [ Gossypium hirsutum (cotton) ]

Gene ID: 121232360, updated on 17-Aug-2021

Summary

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Gene symbol
LOC121232360
Gene description
secreted RxLR effector protein 161-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC121232360 in Genome Data Viewer
Location:
chromosome: A07
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A07 NC_053430.1 (12217724..12218833, complement)

Chromosome A07 - NC_053430.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC121232117 Neighboring gene E3 ubiquitin-protein ligase At3g02290-like Neighboring gene truncated transcription factor CAULIFLOWER A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053430.1 Chromosome A07 Reference Gossypium_hirsutum_v2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
secreted RxLR effector protein 161-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium hirsutum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053430.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    12217724..12218833 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041118170.1 → XP_040974104.1  secreted RxLR effector protein 161-like

    Conserved Domains (1) summary
    cd09272
    Location:146 → 244
    RNase_HI_RT_Ty1; Ty1/Copia family of RNase HI in long-term repeat retroelements
Nucleotide Protein
Heading Accession and Version

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