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ARFGAP1 ADP ribosylation factor GTPase activating protein 1 [ Ochotona curzoniae (black-lipped pika) ]

Gene ID: 121161705, updated on 22-Mar-2024

Summary

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Gene symbol
ARFGAP1
Gene description
ADP ribosylation factor GTPase activating protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona curzoniae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current NIBS_Ocur_1.0 (GCF_017591425.1) Unplaced Scaffold NW_024466391.1 (2631478..2640128)

NW_024466391.1Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix family member e23 Neighboring gene YTH N6-methyladenosine RNA binding protein F1 Neighboring gene baculoviral IAP repeat containing 7 Neighboring gene collagen type XX alpha 1 chain Neighboring gene cholinergic receptor nicotinic alpha 4 subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024466391 Unplaced Scaffold Reference NIBS_Ocur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor GTPase-activating protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ochotona curzoniae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NIBS_Ocur_1.0 Primary Assembly

Genomic

  1. NW_024466391.1 Reference NIBS_Ocur_1.0 Primary Assembly

    Range
    2631478..2640128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040988283.1 → XP_040844217.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X8

    Conserved Domains (1) summary
    cd08959
    Location:6 → 121
    ArfGap_ArfGap1_like; ARF1 GTPase-activating protein 1-like

  2. XM_040988277.1 → XP_040844211.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X3

    Conserved Domains (1) summary
    cl28907
    Location:41 → 104
    ArfGap; GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)

  3. XM_040988275.1 → XP_040844209.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X1

    Conserved Domains (1) summary
    cd08959
    Location:6 → 121
    ArfGap_ArfGap1_like; ARF1 GTPase-activating protein 1-like

  4. XM_040988276.1 → XP_040844210.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X2

    Conserved Domains (1) summary
    cd08959
    Location:6 → 121
    ArfGap_ArfGap1_like; ARF1 GTPase-activating protein 1-like

  5. XM_040988281.1 → XP_040844215.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X6

    Conserved Domains (1) summary
    cd08959
    Location:6 → 121
    ArfGap_ArfGap1_like; ARF1 GTPase-activating protein 1-like

  6. XM_040988278.1 → XP_040844212.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X4

    Conserved Domains (1) summary
    cd08959
    Location:6 → 121
    ArfGap_ArfGap1_like; ARF1 GTPase-activating protein 1-like

  7. XM_040988280.1 → XP_040844214.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X5

    Conserved Domains (2) summary
    COG5347
    Location:2 → 302
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    cd08959
    Location:6 → 121
    ArfGap_ArfGap1_like; ARF1 GTPase-activating protein 1-like

  8. XM_040988282.1 → XP_040844216.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X7

    Conserved Domains (1) summary
    cd08959
    Location:6 → 121
    ArfGap_ArfGap1_like; ARF1 GTPase-activating protein 1-like
Nucleotide Protein
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