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ARFGAP1 ADP ribosylation factor GTPase activating protein 1 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120868822, updated on 21-Mar-2024

Summary

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Gene symbol
ARFGAP1
Gene description
ADP ribosylation factor GTPase activating protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070194.1 (29040398..29050569)

NW_024070194.1Genomic Context describing neighboring genes Neighboring gene YTH N6-methyladenosine RNA binding protein F1 Neighboring gene baculoviral IAP repeat containing 7 Neighboring gene collagen type XX alpha 1 chain Neighboring gene cholinergic receptor nicotinic alpha 4 subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070194 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor GTPase-activating protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070194.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    29040398..29050569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040247695.1 → XP_040103629.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X2

    Conserved Domains (2) summary
    COG5347
    Location:2 → 255
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    cd08830
    Location:6 → 121
    ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

  2. XM_040247693.1 → XP_040103627.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X1

    Conserved Domains (1) summary
    cd08830
    Location:6 → 121
    ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

  3. XM_040247696.1 → XP_040103630.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X3

    Conserved Domains (1) summary
    cd08830
    Location:6 → 121
    ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

  4. XM_040247697.1 → XP_040103631.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X4

    Conserved Domains (1) summary
    cd08830
    Location:6 → 121
    ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

  5. XM_040247698.1 → XP_040103632.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X5

    Conserved Domains (2) summary
    COG5347
    Location:2 → 344
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    cd08830
    Location:6 → 121
    ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

  6. XM_040247699.1 → XP_040103633.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X6

    Conserved Domains (2) summary
    COG5347
    Location:2 → 342
    COG5347; GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
    cd08830
    Location:6 → 121
    ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

  7. XM_040247694.1 → XP_040103628.1  ADP-ribosylation factor GTPase-activating protein 1 isoform X1

    Conserved Domains (1) summary
    cd08830
    Location:6 → 121
    ArfGap_ArfGap1; Arf1 GTPase-activating protein 1

RNA

  1. XR_005722318.1 RNA Sequence

  2. XR_005722319.1 RNA Sequence

  3. XR_005722320.1 RNA Sequence

Nucleotide Protein
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