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ahctf1 AT hook containing transcription factor 1 [ Polypterus senegalus (gray bichir) ]

Gene ID: 120526007, updated on 21-Mar-2024

Summary

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Gene symbol
ahctf1
Gene description
AT hook containing transcription factor 1
Locus tag
GTO96_0015433
Gene type
protein coding
RefSeq status
MODEL
Organism
Polypterus senegalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Polypterus
Also known as
Ahctf1_0; Ahctf1_1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
36
Annotation release Status Assembly Chr Location
100 current ASM1683550v1 (GCF_016835505.1) 3 NC_053156.1 (237716451..237858192, complement)

Chromosome 3 - NC_053156.1Genomic Context describing neighboring genes Neighboring gene saccharopine dehydrogenase-like oxidoreductase Neighboring gene kinesin family member 28 Neighboring gene synaptosome associated protein 25b Neighboring gene ankyrin repeat and EF-hand domain containing 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053156.1 Chromosome 3 Reference ASM1683550v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein ELYS
Names
ELYS protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polypterus senegalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1683550v1 Primary Assembly

Genomic

  1. NC_053156.1 Reference ASM1683550v1 Primary Assembly

    Range
    237716451..237858192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039748808.1 → XP_039604742.1  protein ELYS isoform X3

    Conserved Domains (1) summary
    pfam16687
    Location:3 → 488
    ELYS-bb; beta-propeller of ELYS nucleoporin

  2. XM_039748807.1 → XP_039604741.1  protein ELYS isoform X2

    Conserved Domains (1) summary
    pfam16687
    Location:3 → 489
    ELYS-bb; beta-propeller of ELYS nucleoporin

  3. XM_039748806.1 → XP_039604740.1  protein ELYS isoform X1

    Conserved Domains (1) summary
    pfam16687
    Location:3 → 489
    ELYS-bb; beta-propeller of ELYS nucleoporin
Nucleotide Protein
Heading Accession and Version

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