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ABCB1 ATP binding cassette subfamily B member 1 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120399500, updated on 21-Mar-2024

Summary

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Gene symbol
ABCB1
Gene description
ATP binding cassette subfamily B member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
31
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 2 NC_052624.1 (41918128..42015710, complement)

Linkage Group 2 - NC_052624.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA binding domain containing 7 Neighboring gene oleoyl-ACP hydrolase Neighboring gene carnitine O-octanoyltransferase Neighboring gene RUN domain containing 3B Neighboring gene solute carrier family 25 member 40

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052624.1 Chromosome 2 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent translocase ABCB1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052624.1 Reference ASM1616193v1 Primary Assembly

    Range
    41918128..42015710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039527801.1 → XP_039383735.1  ATP-dependent translocase ABCB1 isoform X1

    Conserved Domains (1) summary
    PTZ00265
    Location:149 → 1272
    PTZ00265; multidrug resistance protein (mdr1); Provisional

  2. XM_039527804.1 → XP_039383738.1  ATP-dependent translocase ABCB1 isoform X4

    Conserved Domains (2) summary
    cd03249
    Location:25 → 261
    ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
    PTZ00265
    Location:24 → 899
    PTZ00265; multidrug resistance protein (mdr1); Provisional

  3. XM_039527805.1 → XP_039383739.1  ATP-dependent translocase ABCB1 isoform X5

    Conserved Domains (3) summary
    cd03249
    Location:87 → 326
    ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
    cd07346
    Location:26 → 59
    ABC_6TM_exporters; TM helix 6 [structural motif]
    cl38913
    Location:1 → 70
    ABC_6TM_exporters; Six-transmembrane helical domain of the ATP-binding cassette transporters

  4. XM_039527802.1 → XP_039383736.1  ATP-dependent translocase ABCB1 isoform X2

    Conserved Domains (1) summary
    PTZ00265
    Location:148 → 1271
    PTZ00265; multidrug resistance protein (mdr1); Provisional

  5. XM_039527799.1 → XP_039383733.1  ATP-dependent translocase ABCB1 isoform X1

    Conserved Domains (1) summary
    PTZ00265
    Location:149 → 1272
    PTZ00265; multidrug resistance protein (mdr1); Provisional

  6. XM_039527803.1 → XP_039383737.1  ATP-dependent translocase ABCB1 isoform X3

    Conserved Domains (3) summary
    cd03249
    Location:398 → 634
    ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
    cd18558
    Location:64 → 370
    ABC_6TM_Pgp_ABCB1; Six-transmembrane helical domain of P-glycoprotein 1 (Pgp) and related proteins
    cd18578
    Location:701 → 898
    ABC_6TM_Pgp_ABCB1_D2_like; Six-transmembrane helical domain 2 (TMD2) of P-glycoprotein 1 (Pgp) and related proteins
Nucleotide Protein
Heading Accession and Version

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