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ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B [ Crotalus tigris (Tiger rattlesnake) ]

Gene ID: 120312823, updated on 21-Mar-2024

Summary

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Gene symbol
ANKS1B
Gene description
ankyrin repeat and sterile alpha motif domain containing 1B
Gene type
protein coding
RefSeq status
MODEL
Organism
Crotalus tigris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Crotalus
Orthologs
human mouse all
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Genomic context

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See ANKS1B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
100 current ASM1654583v1 (GCF_016545835.1) Unplaced Scaffold NW_024097071.1 (510185..869654, complement)

NW_024097071.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 3 Neighboring gene IKBKB interacting protein Neighboring gene apoptotic peptidase activating factor 1 Neighboring gene bridge-like lipid transfer protein family member 3B Neighboring gene actin related protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024097071 Unplaced Scaffold Reference ASM1654583v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and sterile alpha motif domain-containing protein 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crotalus tigris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654583v1

Genomic

  1. NW_024097071.1 Reference ASM1654583v1

    Range
    510185..869654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039354033.1 → XP_039209967.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X5

    Conserved Domains (6) summary
    PHA02874
    Location:49 → 277
    PHA02874; ankyrin repeat protein; Provisional
    cd09499
    Location:773 → 839
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:844 → 908
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:1008 → 1160
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:58 → 89
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:63 → 158
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_039354032.1 → XP_039209966.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X4

    Conserved Domains (5) summary
    cd09499
    Location:807 → 873
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:878 → 942
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:1042 → 1187
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:58 → 89
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:63 → 158
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_039354031.1 → XP_039209965.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X3

    Conserved Domains (5) summary
    cd09499
    Location:807 → 873
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:878 → 942
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:1042 → 1187
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:58 → 89
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:63 → 158
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_039354030.1 → XP_039209964.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X2

    Conserved Domains (5) summary
    cd09499
    Location:807 → 873
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:878 → 942
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:1042 → 1194
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:58 → 89
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:63 → 158
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_039354029.1 → XP_039209963.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X1

    Conserved Domains (5) summary
    cd09499
    Location:807 → 873
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:878 → 942
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:1042 → 1194
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:58 → 89
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:63 → 158
    Ank_2; Ankyrin repeats (3 copies)

  6. XM_039354036.1 → XP_039209970.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X7

    Conserved Domains (6) summary
    cd09499
    Location:629 → 695
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:700 → 764
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:864 → 1016
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:17 → 46
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:2 → 78
    Ank_2; Ankyrin repeats (3 copies)
    cl40437
    Location:17 → 155
    TRPV; Transient Receptor Potential channel, Vanilloid subfamily (TRPV)

  7. XM_039354037.1 → XP_039209971.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X7

    Conserved Domains (6) summary
    cd09499
    Location:629 → 695
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:700 → 764
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:864 → 1016
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:17 → 46
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:2 → 78
    Ank_2; Ankyrin repeats (3 copies)
    cl40437
    Location:17 → 155
    TRPV; Transient Receptor Potential channel, Vanilloid subfamily (TRPV)

  8. XM_039354038.1 → XP_039209972.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X8

    Conserved Domains (3) summary
    cd09499
    Location:36 → 102
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:107 → 171
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:271 → 416
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain

  9. XM_039354039.1 → XP_039209973.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X9

    Conserved Domains (3) summary
    cd09499
    Location:36 → 102
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:107 → 171
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:271 → 416
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain

  10. XM_039354034.1 → XP_039209968.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X6

    Conserved Domains (5) summary
    cd09499
    Location:807 → 873
    SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
    cd09500
    Location:878 → 942
    SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
    cd01274
    Location:1042 → 1167
    PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
    sd00045
    Location:58 → 89
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:63 → 158
    Ank_2; Ankyrin repeats (3 copies)

RNA

  1. XR_005557974.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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