U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ajap1 adherens junctions associated protein 1 [ Scyliorhinus canicula (smaller spotted catshark) ]

Gene ID: 119979511, updated on 21-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ajap1
Gene description
adherens junctions associated protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Scyliorhinus canicula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Elasmobranchii; Galeomorphii; Galeoidea; Carcharhiniformes; Scyliorhinidae; Scyliorhinus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
100 current sScyCan1.1 (GCF_902713615.1) 16 NC_052161.1 (104425770..104742252, complement)

Chromosome 16 - NC_052161.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119950866 Neighboring gene uncharacterized LOC119979510 Neighboring gene uncharacterized LOC119950646 Neighboring gene uncharacterized LOC119950930

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_052161.1 Chromosome 16 Reference sScyCan1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell-cell contact zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
adherens junction-associated protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Scyliorhinus canicula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference sScyCan1.1 Primary Assembly

Genomic

  1. NC_052161.1 Reference sScyCan1.1 Primary Assembly

    Range
    104425770..104742252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038821840.1 → XP_038677768.1  adherens junction-associated protein 1 isoform X4

    Conserved Domains (1) summary
    pfam15298
    Location:173 → 381
    AJAP1_PANP_C; AJAP1/PANP C-terminus

  2. XM_038821838.1 → XP_038677766.1  adherens junction-associated protein 1 isoform X2

    Conserved Domains (1) summary
    pfam15298
    Location:187 → 395
    AJAP1_PANP_C; AJAP1/PANP C-terminus

  3. XM_038821839.1 → XP_038677767.1  adherens junction-associated protein 1 isoform X3

    Conserved Domains (1) summary
    pfam15298
    Location:182 → 390
    AJAP1_PANP_C; AJAP1/PANP C-terminus

  4. XM_038821841.1 → XP_038677769.1  adherens junction-associated protein 1 isoform X4

    Conserved Domains (1) summary
    pfam15298
    Location:173 → 381
    AJAP1_PANP_C; AJAP1/PANP C-terminus

  5. XM_038821837.1 → XP_038677765.1  adherens junction-associated protein 1 isoform X1

    Conserved Domains (1) summary
    pfam15298
    Location:196 → 400
    AJAP1_PANP_C; AJAP1/PANP C-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.