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ARID2 AT-rich interaction domain 2 [ Dermochelys coriacea (leatherback sea turtle) ]

Gene ID: 119857152, updated on 21-Mar-2024

Summary

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Gene symbol
ARID2
Gene description
AT-rich interaction domain 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Dermochelys coriacea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Dermochelyidae; Dermochelys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
101 current rDerCor1.pri.v4 (GCF_009764565.3) 1 NC_050068.2 (296181626..296373296, complement)
100 previous assembly rDerCor1.pri.v3 (GCF_009764565.2) 1 NC_050068.1 (296207171..296385705, complement)

Chromosome 1 - NC_050068.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122456178 Neighboring gene solute carrier family 38 member 1 Neighboring gene SR-related CTD associated factor 11 Neighboring gene uncharacterized LOC122456183 Neighboring gene uncharacterized LOC122456184 Neighboring gene uncharacterized LOC119862345 Neighboring gene uncharacterized LOC122456185 Neighboring gene anoctamin 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF superfamily-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AT-rich interactive domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dermochelys coriacea Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rDerCor1.pri.v4

Genomic

  1. NC_050068.2 Reference rDerCor1.pri.v4

    Range
    296181626..296373296 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043494343.1 → XP_043350278.1  AT-rich interactive domain-containing protein 2 isoform X3

    Conserved Domains (2) summary
    pfam09606
    Location:680 → 1159
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd16866
    Location:15 → 102
    ARID_ARID2; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 2 (ARID2) and similar proteins

  2. XM_043494338.1 → XP_043350273.1  AT-rich interactive domain-containing protein 2 isoform X2

    Conserved Domains (2) summary
    pfam09606
    Location:650 → 1129
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd16866
    Location:2 → 72
    ARID_ARID2; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 2 (ARID2) and similar proteins

  3. XM_038405654.2 → XP_038261582.1  AT-rich interactive domain-containing protein 2 isoform X1

    Conserved Domains (3) summary
    pfam09606
    Location:680 → 1159
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cd16866
    Location:15 → 102
    ARID_ARID2; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 2 (ARID2) and similar proteins
    pfam02257
    Location:518 → 598
    RFX_DNA_binding; RFX DNA-binding domain

  4. XM_043494347.1 → XP_043350282.1  AT-rich interactive domain-containing protein 2 isoform X4

    Conserved Domains (1) summary
    pfam09606
    Location:326 → 764
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
Nucleotide Protein
Heading Accession and Version

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