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hnrnph1 heterogeneous nuclear ribonucleoprotein H1 [ Acanthopagrus latus (yellowfin seabream) ]

Gene ID: 119007115, updated on 21-Mar-2024

Summary

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Gene symbol
hnrnph1
Gene description
heterogeneous nuclear ribonucleoprotein H1
See related
EnsemblRapid:ENSALTG00010020024
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthopagrus latus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
Orthologs
zebrafish all
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Genomic context

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See hnrnph1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
12
Annotation release Status Assembly Chr Location
100 current fAcaLat1.1 (GCF_904848185.1) 18 NC_051056.1 (16401332..16407089, complement)

Chromosome 18 - NC_051056.1Genomic Context describing neighboring genes Neighboring gene heparin-binding EGF-like growth factor a Neighboring gene RUN and FYVE domain containing 1 Neighboring gene ankyrin repeat and KH domain containing 1 Neighboring gene HIG1 hypoxia inducible domain family, member 2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051056.1 Chromosome 18 Reference fAcaLat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAcaLat1.1 Primary Assembly

Genomic

  1. NC_051056.1 Reference fAcaLat1.1 Primary Assembly

    Range
    16401332..16407089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037076501.1 → XP_036932396.1  heterogeneous nuclear ribonucleoprotein H isoform X1

    Related
    ENSALTP00010054190.1, ENSALTT00010058423.1
    Conserved Domains (5) summary
    PRK11634
    Location:158 → 245
    PRK11634; ATP-dependent RNA helicase DeaD; Provisional
    pfam08080
    Location:235 → 254
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:5 → 83
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:98 → 187
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:253 → 328
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  2. XM_037076503.1 → XP_036932398.1  heterogeneous nuclear ribonucleoprotein H isoform X2

    Conserved Domains (5) summary
    PRK11634
    Location:158 → 245
    PRK11634; ATP-dependent RNA helicase DeaD; Provisional
    pfam08080
    Location:235 → 254
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:5 → 83
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:98 → 187
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:253 → 328
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins

  3. XM_037076502.1 → XP_036932397.1  heterogeneous nuclear ribonucleoprotein H isoform X1

    Conserved Domains (5) summary
    PRK11634
    Location:158 → 245
    PRK11634; ATP-dependent RNA helicase DeaD; Provisional
    pfam08080
    Location:235 → 254
    zf-RNPHF; RNPHF zinc finger
    cd12729
    Location:5 → 83
    RRM1_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
    cd12731
    Location:98 → 187
    RRM2_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein hnRNP H, hnRNP H2, hnRNP F and similar proteins
    cd12734
    Location:253 → 328
    RRM3_hnRNPH_hnRNPH2_hnRNPF; RNA recognition motif 3 (RRM3) found in heterogeneous nuclear ribonucleoprotein hnRNP H , hnRNP H2, hnRNP F and similar proteins
Nucleotide Protein
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