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ATG4B autophagy related 4B cysteine peptidase [ Myotis myotis ]

Gene ID: 118661907, updated on 30-Mar-2024

Summary

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Gene symbol
ATG4B
Gene description
autophagy related 4B cysteine peptidase
Locus tag
mMyoMyo1_001151
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis myotis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See ATG4B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current mMyoMyo1.p (GCF_014108235.1) Unplaced Scaffold NW_023416390.1 (37036004..37068847)

NW_023416390.1Genomic Context describing neighboring genes Neighboring gene BCL2 family apoptosis regulator BOK Neighboring gene THAP domain containing 4 Neighboring gene deoxythymidylate kinase Neighboring gene inhibitor of growth family member 5 Neighboring gene D-2-hydroxyglutarate dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023416390 Unplaced Scaffold Reference mMyoMyo1.p Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-phosphatidylethanolamide deconjugating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine protease ATG4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis myotis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMyoMyo1.p Primary Assembly

Genomic

  1. NW_023416390.1 Reference mMyoMyo1.p Primary Assembly

    Range
    37036004..37068847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036320428.1 → XP_036176321.1  cysteine protease ATG4B isoform X4

    UniProtKB/TrEMBL
    A0A7J7WFE7, A0A7J7WG52
    Conserved Domains (1) summary
    pfam03416
    Location:39 → 335
    Peptidase_C54; Peptidase family C54

  2. XM_036320425.1 → XP_036176318.1  cysteine protease ATG4B isoform X1

    UniProtKB/TrEMBL
    A0A7J7WFE7
    Conserved Domains (1) summary
    pfam03416
    Location:63 → 359
    Peptidase_C54; Peptidase family C54

  3. XM_036320427.1 → XP_036176320.1  cysteine protease ATG4B isoform X3

    Conserved Domains (1) summary
    pfam03416
    Location:63 → 343
    Peptidase_C54; Peptidase family C54

  4. XM_036320429.1 → XP_036176322.1  cysteine protease ATG4B isoform X5

    UniProtKB/TrEMBL
    A0A7J7WFE7
    Conserved Domains (1) summary
    pfam03416
    Location:63 → 325
    Peptidase_C54; Peptidase family C54

  5. XM_036320430.1 → XP_036176323.1  cysteine protease ATG4B isoform X6

    Conserved Domains (1) summary
    pfam03416
    Location:63 → 292
    Peptidase_C54; Peptidase family C54

  6. XM_036320426.1 → XP_036176319.1  cysteine protease ATG4B isoform X2

    UniProtKB/TrEMBL
    A0A7J7WFE7, A0A7J7WG09
    Conserved Domains (1) summary
    pfam03416
    Location:57 → 353
    Peptidase_C54; Peptidase family C54
Nucleotide Protein
Heading Accession and Version

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