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afmid arylformamidase [ Scophthalmus maximus (turbot) ]

Gene ID: 118313149, updated on 20-Mar-2024

Summary

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Gene symbol
afmid
Gene description
arylformamidase
See related
EnsemblRapid:ENSSMAG00025025777
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 8 NC_061522.1 (17841627..17847888)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 8 NC_049695.1 (17761513..17767744)

Chromosome 8 - NC_061522.1Genomic Context describing neighboring genes Neighboring gene synaptogyrin 2b Neighboring gene thymidine kinase 1, soluble Neighboring gene calcium activated nucleotidase 1b Neighboring gene O-GlcNAcase like Neighboring gene uncharacterized LOC118313157 Neighboring gene peroxisome proliferator-activated receptor gamma coactivator-related protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-throughput sequence analysis of turbot (Scophthalmus maximus) transcriptome using 454-pyrosequencing for the discovery of antiviral immune genes. Pereiro P, et al. PLoS One, 2012. PMID 22629298, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arylformamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kynurenine formamidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061522.1 Reference ASM2237912v1 Primary Assembly

    Range
    17841627..17847888
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035638461.2 → XP_035494354.1  kynurenine formamidase

    UniProtKB/TrEMBL
    A0A8D2ZY40
    Related
    ENSSMAP00025076007.1, ENSSMAT00025084369.1
    Conserved Domains (1) summary
    COG0657
    Location:1 → 267
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
Nucleotide Protein Strain
Heading Accession and Version

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