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AEBP1 AE binding protein 1 [ Trachemys scripta elegans ]

Gene ID: 117872869, updated on 19-Mar-2024

Summary

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Gene symbol
AEBP1
Gene description
AE binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachemys scripta elegans (sub-species: elegans)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
21
Annotation release Status Assembly Chr Location
100 current CAS_Tse_1.0 (GCF_013100865.1) 2 NC_048299.1 (142867448..142891760, complement)

Chromosome 2 - NC_048299.1Genomic Context describing neighboring genes Neighboring gene antimicrobial peptide NK-lysin-like Neighboring gene DNA polymerase delta 2, accessory subunit Neighboring gene matrix metalloproteinase-17-like Neighboring gene capping actin protein, gelsolin like Neighboring gene drebrin like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048299.1 Chromosome 2 Reference CAS_Tse_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adipocyte enhancer-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAS_Tse_1.0 Primary Assembly

Genomic

  1. NC_048299.1 Reference CAS_Tse_1.0 Primary Assembly

    Range
    142867448..142891760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034761693.1 → XP_034617584.1  adipocyte enhancer-binding protein 1

Nucleotide Protein
Heading Accession and Version

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