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arhgef19 Rho guanine nucleotide exchange factor (GEF) 19 [ Pseudochaenichthys georgianus (South Georgia icefish) ]

Gene ID: 117449780, updated on 19-Mar-2024

Summary

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Gene symbol
arhgef19
Gene description
Rho guanine nucleotide exchange factor (GEF) 19
See related
EnsemblRapid:ENSPGEG00000003894
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudochaenichthys georgianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 7
Exon count:
19
Annotation release Status Assembly Chr Location
100 current fPseGeo1.1 (GCF_902827115.1) 7 NC_047509.1 (30749050..30779575)

Chromosome 7 - NC_047509.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing, family M (with RUN domain) member 2 Neighboring gene anoctamin-7-like Neighboring gene anoctamin-7-like Neighboring gene uncharacterized LOC117449782 Neighboring gene uncharacterized LOC117449784 Neighboring gene uncharacterized LOC117449783

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047509.1 Chromosome 7 Reference fPseGeo1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho guanine nucleotide exchange factor 19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudochaenichthys georgianus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPseGeo1.1

Genomic

  1. NC_047509.1 Reference fPseGeo1.1

    Range
    30749050..30779575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034087655.1 → XP_033943546.1  rho guanine nucleotide exchange factor 19 isoform X2

    Conserved Domains (3) summary
    cd11940
    Location:889 → 943
    SH3_ARHGEF5_19; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF5 and ARHGEF19
    cd01221
    Location:749 → 871
    PH_ephexin; Ephexin Pleckstrin homology (PH) domain
    pfam00621
    Location:551 → 727
    RhoGEF; RhoGEF domain

  2. XM_034087657.1 → XP_033943548.1  rho guanine nucleotide exchange factor 19 isoform X2

    Conserved Domains (3) summary
    cd11940
    Location:889 → 943
    SH3_ARHGEF5_19; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF5 and ARHGEF19
    cd01221
    Location:749 → 871
    PH_ephexin; Ephexin Pleckstrin homology (PH) domain
    pfam00621
    Location:551 → 727
    RhoGEF; RhoGEF domain

  3. XM_034087656.1 → XP_033943547.1  rho guanine nucleotide exchange factor 19 isoform X2

    Related
    ENSPGEP00000008261.1, ENSPGET00000008660.1
    Conserved Domains (3) summary
    cd11940
    Location:889 → 943
    SH3_ARHGEF5_19; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF5 and ARHGEF19
    cd01221
    Location:749 → 871
    PH_ephexin; Ephexin Pleckstrin homology (PH) domain
    pfam00621
    Location:551 → 727
    RhoGEF; RhoGEF domain

  4. XM_034087654.1 → XP_033943545.1  rho guanine nucleotide exchange factor 19 isoform X1

    Conserved Domains (3) summary
    cd11940
    Location:922 → 976
    SH3_ARHGEF5_19; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF5 and ARHGEF19
    cd01221
    Location:782 → 904
    PH_ephexin; Ephexin Pleckstrin homology (PH) domain
    pfam00621
    Location:584 → 760
    RhoGEF; RhoGEF domain

  5. XM_034087659.1 → XP_033943550.1  rho guanine nucleotide exchange factor 19 isoform X3

    Conserved Domains (2) summary
    pfam00621
    Location:584 → 760
    RhoGEF; RhoGEF domain
    cl17171
    Location:782 → 839
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
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