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Krtap13-20 keratin associated protein 13-20 [ Mus musculus (house mouse) ]

Gene ID: 117172, updated on 27-Feb-2024

Summary

Official Symbol
Krtap13-20provided by MGI
Official Full Name
keratin associated protein 13-20provided by MGI
Primary source
MGI:MGI:2152338
See related
Ensembl:ENSMUSG00000068078 AllianceGenome:MGI:2152338
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2310034C09Rik
Summary
Is expressed in several structures, including autopod; diaphragm; limb mesenchyme; tongue muscle; and vertebral axis musculature. Orthologous to human KRTAP13-3 (keratin associated protein 13-3). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
16 C3.3; 16 51.4 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (88555735..88556677)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (88758847..88759789)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 13-1 Neighboring gene STARR-seq mESC enhancer starr_41417 Neighboring gene keratin associated protein 13 Neighboring gene keratin associated protein 13-21 Neighboring gene keratin associated protein 13-23

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC117172

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_054100.3NP_473441.1  uncharacterized protein LOC117172

    See identical proteins and their annotated locations for NP_473441.1

    Status: VALIDATED

    Source sequence(s)
    AC125199
    Consensus CDS
    CCDS79475.1
    UniProtKB/TrEMBL
    Q9D746
    Related
    ENSMUSP00000140130.2, ENSMUST00000089111.5
    Conserved Domains (1) summary
    pfam05287
    Location:1209
    PMG; PMG protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    88555735..88556677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)