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ATG4B autophagy related 4B cysteine peptidase [ Trachypithecus francoisi (Francois's langur) ]

Gene ID: 117094266, updated on 19-Mar-2024

Summary

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Gene symbol
ATG4B
Gene description
autophagy related 4B cysteine peptidase
See related
EnsemblRapid:ENSTFRG00000025275
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachypithecus francoisi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Trachypithecus
Orthologs
human mouse all
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Genomic context

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See ATG4B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Tfra_2.0 (GCF_009764315.1) Unplaced Scaffold NW_022681458.1 (272813..304962, complement)

NW_022681458.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117094264 Neighboring gene deoxythymidylate kinase Neighboring gene THAP domain containing 4 Neighboring gene BCL2 family apoptosis regulator BOK Neighboring gene serine/threonine kinase 25 Neighboring gene FERM, ARH/RhoGEF and pleckstrin domain protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022681458 Unplaced Scaffold Reference Tfra_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-phosphatidylethanolamide deconjugating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine protease ATG4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachypithecus francoisi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tfra_2.0 Primary Assembly

Genomic

  1. NW_022681458.1 Reference Tfra_2.0 Primary Assembly

    Range
    272813..304962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033229466.1 → XP_033085357.1  cysteine protease ATG4B isoform X3

    Related
    ENSTFRP00000029356.1, ENSTFRT00000037058.1
    Conserved Domains (1) summary
    pfam03416
    Location:39 → 335
    Peptidase_C54; Peptidase family C54

  2. XM_033229464.1 → XP_033085355.1  cysteine protease ATG4B isoform X1

    Conserved Domains (1) summary
    pfam03416
    Location:97 → 442
    Peptidase_C54; Peptidase family C54

  3. XM_033229465.1 → XP_033085356.1  cysteine protease ATG4B isoform X2

    Conserved Domains (1) summary
    pfam03416
    Location:39 → 384
    Peptidase_C54; Peptidase family C54

  4. XM_033229467.1 → XP_033085358.1  cysteine protease ATG4B isoform X4

    Conserved Domains (1) summary
    pfam03416
    Location:1 → 310
    Peptidase_C54; Peptidase family C54

  5. XM_033229469.1 → XP_033085360.1  cysteine protease ATG4B isoform X5

    Conserved Domains (1) summary
    pfam03416
    Location:1 → 261
    Peptidase_C54; Peptidase family C54

  6. XM_033229468.1 → XP_033085359.1  cysteine protease ATG4B isoform X4

    Conserved Domains (1) summary
    pfam03416
    Location:1 → 310
    Peptidase_C54; Peptidase family C54
Nucleotide Protein
Heading Accession and Version

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