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ANAPC4 anaphase promoting complex subunit 4 [ Lontra canadensis (Northern American river otter) ]

Gene ID: 116865597, updated on 18-Mar-2024

Summary

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Gene symbol
ANAPC4
Gene description
anaphase promoting complex subunit 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Lontra canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lontra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current GSC_riverotter_1.0 (GCF_010015895.1) Unplaced Scaffold NW_022630995.1 (47429767..47474507, complement)

NW_022630995.1Genomic Context describing neighboring genes Neighboring gene SEL1L family member 3 Neighboring gene solute carrier family 34 member 2 Neighboring gene zinc finger CCHC-type containing 4 Neighboring gene nucleoside diphosphate kinase A-like Neighboring gene phosphatidylinositol 4-kinase type 2 beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022630995 Unplaced Scaffold Reference GSC_riverotter_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anaphase-promoting complex-dependent catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mitotic metaphase/anaphase transition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K11-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of anaphase-promoting complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anaphase-promoting complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lontra canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_riverotter_1.0

Genomic

  1. NW_022630995.1 Reference GSC_riverotter_1.0

    Range
    47429767..47474507 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032853870.1 → XP_032709761.1  anaphase-promoting complex subunit 4 isoform X1

    Conserved Domains (3) summary
    sd00039
    Location:24 → 59
    7WD40; WD40 repeat [structural motif]
    pfam12894
    Location:26 → 118
    ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain
    pfam12896
    Location:232 → 431
    ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

  2. XM_032853861.1 → XP_032709752.1  anaphase-promoting complex subunit 4 isoform X1

    Conserved Domains (3) summary
    sd00039
    Location:24 → 59
    7WD40; WD40 repeat [structural motif]
    pfam12894
    Location:26 → 118
    ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain
    pfam12896
    Location:232 → 431
    ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

  3. XM_032853887.1 → XP_032709778.1  anaphase-promoting complex subunit 4 isoform X3

    Conserved Domains (1) summary
    pfam12896
    Location:91 → 290
    ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4

  4. XM_032853878.1 → XP_032709769.1  anaphase-promoting complex subunit 4 isoform X2

    Conserved Domains (3) summary
    sd00039
    Location:24 → 59
    7WD40; WD40 repeat [structural motif]
    pfam12894
    Location:26 → 118
    ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain
    pfam12896
    Location:232 → 431
    ANAPC4; Anaphase-promoting complex, cyclosome, subunit 4
Nucleotide Protein
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