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SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116824622, updated on 11-Apr-2024

Summary

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Gene symbol
SSU72
Gene description
SSU72 homolog, RNA polymerase II CTD phosphatase
See related
Ensembl:ENSCABG00000000579
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
human mouse all
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Genomic context

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See SSU72 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022641788.1 (3160269..3222455, complement)

NW_022641788.1Genomic Context describing neighboring genes Neighboring gene ATPase family AAA domain containing 3A Neighboring gene transmembrane protein 240 Neighboring gene uncharacterized LOC116824623 Neighboring gene actin-related protein T2-like Neighboring gene uncharacterized LOC116824624

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022641788 Unplaced Scaffold Reference ASM359739v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II CTD heptapeptide repeat phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in termination of RNA polymerase II transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase II subunit A C-terminal domain phosphatase SSU72

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022641788.1 Reference ASM359739v1

    Range
    3160269..3222455 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032780029.1 → XP_032635920.1  RNA polymerase II subunit A C-terminal domain phosphatase SSU72

    UniProtKB/TrEMBL
    A0A8C0G247
    Related
    ENSCABP00000000645.1, ENSCABT00000000705.1
    Conserved Domains (1) summary
    pfam04722
    Location:6 → 194
    Ssu72; Ssu72-like protein
Nucleotide Protein
Heading Accession and Version

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