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atp5fa1 ATP synthase F1 subunit alpha [ Sparus aurata (gilthead seabream) ]

Gene ID: 115592427, updated on 17-Mar-2024

Summary

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Gene symbol
atp5fa1
Gene description
ATP synthase F1 subunit alpha
See related
Ensembl:ENSSAUG00010001552
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
Also known as
ATP5A1; atp5f1a
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 12 NC_044198.1 (20621686..20626858)

Chromosome 12 - NC_044198.1Genomic Context describing neighboring genes Neighboring gene arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2Ca Neighboring gene uncharacterized LOC115592729 Neighboring gene arkadia (rnf111) N-terminal like PKA signaling regulator 2n Neighboring gene dnaJ homolog subfamily B member 5-like Neighboring gene huluwa

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044198.1 Chromosome 12 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the molecular signatures of oxidative phosphorylation to cope with the nutritionally changing metabolic capabilities of liver and muscle tissues in farmed fish. Bermejo-Nogales A, et al. PLoS One, 2015. PMID 25875231, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATP synthase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial proton-transporting ATP synthase, catalytic core IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting ATP synthase complex, catalytic core F(1) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit alpha, mitochondrial
Names
ATP synthase subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044198.1 Reference fSpaAur1.1 Primary Assembly

    Range
    20621686..20626858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030435121.1 → XP_030290981.1  ATP synthase subunit alpha, mitochondrial

    UniProtKB/TrEMBL
    A0A0F6MX10
    Related
    ENSSAUP00010003475.1, ENSSAUT00010003766.1
    Conserved Domains (1) summary
    PRK09281
    Location:48 → 550
    PRK09281; F0F1 ATP synthase subunit alpha; Validated
Nucleotide Protein
Heading Accession and Version

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