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atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 [ Sparus aurata (gilthead seabream) ]

Gene ID: 115591857, updated on 17-Mar-2024

Summary

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Gene symbol
atpaf1
Gene description
ATP synthase mitochondrial F1 complex assembly factor 1
See related
Ensembl:ENSSAUG00010007888
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 11 NC_044197.1 (31760064..31781973)

Chromosome 11 - NC_044197.1Genomic Context describing neighboring genes Neighboring gene cylindromatosis (turban tumor syndrome), like Neighboring gene zinc finger CCCH-type containing 3 Neighboring gene MAF bZIP transcription factor Aa Neighboring gene uncharacterized LOC115591040 Neighboring gene rhophilin, Rho GTPase binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044197.1 Chromosome 11 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A transcriptomic approach to study the effect of long-term starvation and diet composition on the expression of mitochondrial oxidative phosphorylation genes in gilthead sea bream (Sparus aurata). Silva-Marrero JI, et al. BMC Genomics, 2017 Oct 11. PMID 29020939, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial proton-transporting ATP synthase complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase mitochondrial F1 complex assembly factor 1
Names
mitochondrial ATP synthase mitochondrial F1 complex assembly factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044197.1 Reference fSpaAur1.1 Primary Assembly

    Range
    31760064..31781973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030434225.1 → XP_030290085.1  ATP synthase mitochondrial F1 complex assembly factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A2D1CH38, A0A671URU1
    Related
    ENSSAUP00010017177.1, ENSSAUT00010018175.1
    Conserved Domains (1) summary
    pfam06644
    Location:62 → 296
    ATP11; ATP11 protein

  2. XM_030434226.1 → XP_030290086.1  ATP synthase mitochondrial F1 complex assembly factor 1 isoform X2

    Conserved Domains (1) summary
    pfam06644
    Location:20 → 240
    ATP11; ATP11 protein
Nucleotide Protein
Heading Accession and Version

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