U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

abcc13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [ Salmo trutta (river trout) ]

Gene ID: 115152559, updated on 17-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
abcc13
Gene description
ATP-binding cassette, sub-family C (CFTR/MRP), member 13
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
20
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 2 NC_042958.1 (18220130..18234113, complement)

Chromosome 2 - NC_042958.1Genomic Context describing neighboring genes Neighboring gene serine-rich adhesin for platelets-like Neighboring gene chondrolectin-like Neighboring gene phosphatidylinositol-specific phospholipase C, X domain containing 2 Neighboring gene pleckstrin homology-like domain family B member 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_042958.1 Chromosome 2 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
canalicular multispecific organic anion transporter 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042958.1 Reference fSalTru1.1 Primary Assembly

    Range
    18220130..18234113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029697383.1 → XP_029553243.1  canalicular multispecific organic anion transporter 2-like isoform X3

    Conserved Domains (1) summary
    TIGR00957
    Location:473 → 992
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)

  2. XM_029697382.1 → XP_029553242.1  canalicular multispecific organic anion transporter 2-like isoform X2

  3. XM_029697381.1 → XP_029553241.1  canalicular multispecific organic anion transporter 2-like isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.