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Actl7a actin-like 7a [ Mus musculus (house mouse) ]

Gene ID: 11470, updated on 11-Apr-2024

Summary

Official Symbol
Actl7aprovided by MGI
Official Full Name
actin-like 7aprovided by MGI
Primary source
MGI:MGI:1343051
See related
Ensembl:ENSMUSG00000070979 AllianceGenome:MGI:1343051
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tact2
Summary
Located in cytoplasm; male germ cell nucleus; and motile cilium. Colocalizes with Golgi apparatus. Human ortholog(s) of this gene implicated in male infertility. Orthologous to human ACTL7A (actin like 7A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Actl7a in Genome Data Viewer
Location:
4 B3; 4 31.66 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (56743422..56744925)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (56743422..56744925)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34687 Neighboring gene predicted gene, 52740 Neighboring gene actin-like 7b Neighboring gene elongator complex protein 1 Neighboring gene actin binding transcription modulator Neighboring gene catenin alpha like 1 Neighboring gene STARR-seq mESC enhancer starr_10312 Neighboring gene STARR-positive B cell enhancer ABC_E9083

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Process Evidence Code Pubs
involved_in acrosome assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in fertilization IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within single fertilization IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
colocalizes_with Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
located_in acrosomal vesicle IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in acrosomal vesicle ISO
Inferred from Sequence Orthology
more info
 
is_active_in actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in male germ cell nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in motile cilium IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
actin-like protein 7A
Names
T-actin-2
actin-like Tact2
actin-like-7-alpha
t-actin 2
testis-specific actin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_009611.3NP_033741.1  actin-like protein 7A

    See identical proteins and their annotated locations for NP_033741.1

    Status: VALIDATED

    Source sequence(s)
    AB023063, BC049610
    Consensus CDS
    CCDS18197.1
    UniProtKB/Swiss-Prot
    A2AMK4, Q9D9P4, Q9JMI5, Q9QY84
    Related
    ENSMUSP00000092692.5, ENSMUST00000095079.6
    Conserved Domains (3) summary
    smart00268
    Location:74440
    ACTIN; Actin
    pfam16840
    Location:670
    ACTL7A_N; Actin-like protein 7A N-terminus
    cl17037
    Location:72440
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    56743422..56744925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)