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ATXN3L ataxin 3 like [ Theropithecus gelada (gelada) ]

Gene ID: 112615605, updated on 15-Mar-2024

Summary

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Gene symbol
ATXN3L
Gene description
ataxin 3 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Theropithecus gelada
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
Orthologs
human all
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Genomic context

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Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Tgel_1.0 (GCF_003255815.1) X NC_037689.1 (292971..294712, complement)

Chromosome X - NC_037689.1Genomic Context describing neighboring genes Neighboring gene heat shock protein HSP 90-beta pseudogene Neighboring gene putative protein SSX6 Neighboring gene putative protein SSX6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037689.1 Chromosome X Reference Tgel_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-3-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tgel_1.0 Primary Assembly

Genomic

  1. NC_037689.1 Reference Tgel_1.0 Primary Assembly

    Range
    292971..294712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025372405.1 → XP_025228190.1  ataxin-3-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8D2GAF2
    Conserved Domains (3) summary
    smart00726
    Location:188 → 206
    UIM; Ubiquitin-interacting motif
    pfam02099
    Location:7 → 108
    Josephin
    pfam16619
    Location:207 → 267
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

  2. XM_025372404.1 → XP_025228189.1  ataxin-3-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8D2GAF2
    Conserved Domains (2) summary
    pfam02099
    Location:13 → 112
    Josephin
    pfam16619
    Location:211 → 271
    SUIM_assoc; Unstructured region C-term to UIM in Ataxin3
Nucleotide Protein
Heading Accession and Version

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