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LOC111330824 E3 ubiquitin-protein ligase MARCH9-like [ Stylophora pistillata ]

Gene ID: 111330824, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111330824
Gene description
E3 ubiquitin-protein ligase MARCH9-like
Locus tag
AWC38_SpisGene10280
See related
EnsemblRapid:LOC111330824
Gene type
protein coding
RefSeq status
MODEL
Organism
Stylophora pistillata
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora
Also known as
MARCH9
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Stylophora pistillata v1 (GCF_002571385.1) Unplaced Scaffold NW_019217943.1 (89760..97834, complement)

NW_019217943.1Genomic Context describing neighboring genes Neighboring gene multidrug resistance protein 1-like Neighboring gene telomere-associated protein RIF1-like Neighboring gene leucine-rich repeat flightless-interacting protein 2-like Neighboring gene CD209 antigen-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019217943 Unplaced Scaffold Reference Stylophora pistillata v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of microRNAs in the coral Stylophora pistillata. Liew YJ, et al. PLoS One, 2014. PMID 24658574, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MARCH4-like; E3 ubiquitin-protein ligase MARCH9-like
Names
E3 ubiquitin-protein ligase MARCH9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stylophora pistillata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stylophora pistillata v1 Primary Assembly

Genomic

  1. NW_019217943.1 Reference Stylophora pistillata v1 Primary Assembly

    Range
    89760..97834 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022935782.1 → XP_022791517.1  E3 ubiquitin-protein ligase MARCH9-like isoform X2

    Related
    XP_022791517.1, XM_022935782.1
    Conserved Domains (1) summary
    cd16495
    Location:162 → 208
    RING_CH-C4HC3_MARCH; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING-CH proteins (MARCH)

  2. XM_022935780.1 → XP_022791515.1  E3 ubiquitin-protein ligase MARCH4-like isoform X1

    UniProtKB/TrEMBL
    A0A2B4S7U0
    Related
    XP_022791515.1, XM_022935780.1
    Conserved Domains (1) summary
    cd16495
    Location:199 → 245
    RING_CH-C4HC3_MARCH; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING-CH proteins (MARCH)

  3. XM_022935781.1 → XP_022791516.1  E3 ubiquitin-protein ligase MARCH4-like isoform X1

    UniProtKB/TrEMBL
    A0A2B4S7U0
    Related
    XP_022791516.1, XM_022935781.1
    Conserved Domains (1) summary
    cd16495
    Location:199 → 245
    RING_CH-C4HC3_MARCH; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING-CH proteins (MARCH)
Nucleotide Protein
Heading Accession and Version

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