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LOC110440113 peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like [ Danio rerio (zebrafish) ]

Gene ID: 110440113, updated on 15-Mar-2024

Summary

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Gene symbol
LOC110440113
Gene description
peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC110440113 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (45015810..45031040)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene origin recognition complex, subunit 2 Neighboring gene LIM-domain binding 1b Neighboring gene si:dkey-93h22.8 Neighboring gene O-GlcNAcase like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007122.7 Chromosome 11 Reference GRCz11 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    45015810..45031040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021479927.1 → XP_021335602.1  peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like

    UniProtKB/TrEMBL
    A0A8M9PVT8
    Conserved Domains (2) summary
    cd12624
    Location:843 → 933
    RRM_PRC; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator-related protein 1 (PRC) and similar proteins
    cl27702
    Location:237 → 570
    COG3942; Surface antigen [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein Strain
Heading Accession and Version

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