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LOC110440078 huntingtin-interacting protein 1-related protein-like [ Danio rerio (zebrafish) ]

Gene ID: 110440078, updated on 15-Mar-2024

Summary

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Gene symbol
LOC110440078
Gene description
huntingtin-interacting protein 1-related protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Annotation information
Annotation category: partial on reference assembly
Orthologs
all
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Genomic context

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See LOC110440078 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (44527391..44535530, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene huntingtin-interacting protein 1-related protein-like Neighboring gene dual specificity phosphatase 26 Neighboring gene nucleophosmin/nucleoplasmin, 2b Neighboring gene seizure 6-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007121.7 Chromosome 10 Reference GRCz11 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
huntingtin-interacting protein 1-related protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    44527391..44535530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021479491.1 → XP_021335166.1  huntingtin-interacting protein 1-related protein-like

    UniProtKB/TrEMBL
    A0A8M9QHD7
    Conserved Domains (2) summary
    smart00307
    Location:33 → 230
    ILWEQ; I/LWEQ domain
    cl26809
    Location:236 → 298
    Sec23_BS; Sec23/Sec24 beta-sandwich domain
Nucleotide Protein Strain
Heading Accession and Version

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