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ACOT11 acyl-CoA thioesterase 11 [ Sus scrofa (pig) ]

Gene ID: 110261225, updated on 15-Mar-2024

Summary

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Official Symbol
ACOT11provided by VGNC
Official Full Name
acyl-CoA thioesterase 11provided by VGNC
Primary source
VGNC:VGNC:85016
See related
Ensembl:ENSSSCG00000037559
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in kidney (RPKM 18.1), heart (RPKM 9.4) and 6 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (157749917..157832280, complement)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 4 Neighboring gene maestro heat like repeat family member 7 Neighboring gene family with sequence similarity 151 member A Neighboring gene uncharacterized LOC106508664 Neighboring gene uncharacterized LOC110261226

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010448.4 Chromosome 6 Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiolester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-coenzyme A thioesterase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    157749917..157832280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021096589.1 → XP_020952248.1  acyl-coenzyme A thioesterase 11 isoform X3

    UniProtKB/TrEMBL
    A0A8D0K683
    Conserved Domains (2) summary
    cd08913
    Location:310 → 549
    START_STARD14-like; Lipid-binding START domain of mammalian STARDT14 and related proteins
    cd03442
    Location:179 → 302
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...

  2. XM_021096588.1 → XP_020952247.1  acyl-coenzyme A thioesterase 11 isoform X3

    UniProtKB/TrEMBL
    A0A8D0K683
    Conserved Domains (2) summary
    cd08913
    Location:310 → 549
    START_STARD14-like; Lipid-binding START domain of mammalian STARDT14 and related proteins
    cd03442
    Location:179 → 302
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...

  3. XM_021096585.1 → XP_020952244.1  acyl-coenzyme A thioesterase 11 isoform X1

    UniProtKB/TrEMBL
    A0A8D1CGI8
    Conserved Domains (2) summary
    cd08913
    Location:352 → 591
    START_STARD14-like; Lipid-binding START domain of mammalian STARDT14 and related proteins
    cd03442
    Location:221 → 344
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...

  4. XM_021096587.1 → XP_020952246.1  acyl-coenzyme A thioesterase 11 isoform X3

    UniProtKB/TrEMBL
    A0A8D0K683
    Conserved Domains (2) summary
    cd08913
    Location:310 → 549
    START_STARD14-like; Lipid-binding START domain of mammalian STARDT14 and related proteins
    cd03442
    Location:179 → 302
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...

  5. XM_021096586.1 → XP_020952245.1  acyl-coenzyme A thioesterase 11 isoform X2

    UniProtKB/TrEMBL
    A0A287B1V5, A0A8D0Y141
    Related
    ENSSSCP00000050388.2, ENSSSCT00000050621.2
    Conserved Domains (2) summary
    cd08913
    Location:333 → 572
    START_STARD14-like; Lipid-binding START domain of mammalian STARDT14 and related proteins
    cd03442
    Location:202 → 325
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...
Nucleotide Protein
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