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LOC110243220 E3 ubiquitin-protein ligase MARCH5 [ Exaiptasia diaphana ]

Gene ID: 110243220, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110243220
Gene description
E3 ubiquitin-protein ligase MARCH5
Locus tag
AC249_AIPGENE24922
See related
EnsemblRapid:LOC110243220
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
Also known as
March5
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018386391.1 (59820..70240, complement)

NW_018386391.1Genomic Context describing neighboring genes Neighboring gene uncharacterized F-box/LRR-repeat protein C02F5.7 Neighboring gene 3'-5' exoribonuclease 1 Neighboring gene adenine DNA glycosylase Neighboring gene cytoplasmic polyadenylation element-binding protein 2 Neighboring gene exocyst complex component 6B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018386391 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. Lehnert EM, et al. BMC Genomics, 2012 Jun 22. PMID 22726260, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MARCH5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018386391.1 Reference Aiptasia genome 1.1

    Range
    59820..70240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021049297.2 → XP_020904956.1  E3 ubiquitin-protein ligase MARCH5

    UniProtKB/TrEMBL
    A0A913XIQ0
    Related
    XP_020904956.1, XM_021049297.2
    Conserved Domains (1) summary
    cd16701
    Location:9 → 69
    RING_CH-C4HC3_MARCH5; RING-CH finger, H2 subclass (C4HC3-type), found in membrane-associated RING-CH5 (MARCH5)
Nucleotide Protein
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