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LOC110241597 follistatin-A [ Exaiptasia diaphana ]

Gene ID: 110241597, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110241597
Gene description
follistatin-A
Locus tag
AC249_AIPGENE335
See related
EnsemblRapid:LOC110241597
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
Also known as
AGRN; Agrin
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018386006.1 (565523..590696, complement)

NW_018386006.1Genomic Context describing neighboring genes Neighboring gene DET1- and DDB1-associated protein 1 Neighboring gene dynein regulatory complex protein 8 Neighboring gene protein unc-13 homolog B Neighboring gene E3 ubiquitin-protein ligase RNF126-B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018386006 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. Lehnert EM, et al. BMC Genomics, 2012 Jun 22. PMID 22726260, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables collagen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
follistatin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018386006.1 Reference Aiptasia genome 1.1

    Range
    565523..590696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028659833.1 → XP_028515634.1  follistatin-A

    UniProtKB/TrEMBL
    A0A913YKJ6
    Related
    XP_028515634.1, XM_028659833.1
    Conserved Domains (2) summary
    smart00280
    Location:217 → 262
    KAZAL; Kazal type serine protease inhibitors
    cd00104
    Location:150 → 190
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
Nucleotide Protein
Heading Accession and Version

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