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ADAMTSL4 ADAMTS like 4 [ Bos indicus (zebu cattle) ]

Gene ID: 109555391, updated on 14-Mar-2024

Summary

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Gene symbol
ADAMTSL4
Gene description
ADAMTS like 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ADAMTSL4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 3 NC_032652.1 (21679031..21687543, complement)

Chromosome 3 - NC_032652.1Genomic Context describing neighboring genes Neighboring gene endosulfine alpha Neighboring gene MCL1 apoptosis regulator, BCL2 family member Neighboring gene uncharacterized LOC109555397 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene extracellular matrix protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032652.1 Chromosome 3 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A preliminary sketch of horn cancer transcriptome in Indian zebu cattle. Tripathi AK, et al. Gene, 2012 Feb 1. PMID 22134011

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADAMTS-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032652.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    21679031..21687543 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019956239.1 → XP_019811798.1  ADAMTS-like protein 4

    UniProtKB/TrEMBL
    A0A6P5AYR5
    Conserved Domains (5) summary
    smart00209
    Location:973 → 1022
    TSP1; Thrombospondin type 1 repeats
    PTZ00441
    Location:48 → 320
    PTZ00441; sporozoite surface protein 2 (SSP2); Provisional
    pfam05986
    Location:480 → 594
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1029 → 1058
    PLAC; PLAC (protease and lacunin) domain
    pfam15402
    Location:186 → 291
    Spc7_N; N-terminus of kinetochore NMS complex subunit Spc7
Nucleotide Protein
Heading Accession and Version

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