U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

acer1.L alkaline ceramidase 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108712779, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
acer1.L
Official Full Name
alkaline ceramidase 1 L homeolog
Primary source
Xenbase:XB-GENE-17341238
Locus tag
XELAEV_18006310mg
See related
EnsemblRapid:ENSXLAG00005015447
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
asah3
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (111153977..111172491, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (99102272..99121270, complement)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase bubblegum family member 2 L homeolog Neighboring gene myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1 L homeolog Neighboring gene acidic nuclear phosphoprotein 32 family member C L homeolog Neighboring gene zinc finger protein 414 L homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables N-acylsphingosine amidohydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables ceramidase activity IEA
Inferred from Electronic Annotation
more info
  
enables dihydroceramidase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within ceramide catabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within sphingolipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
alkaline ceramidase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    111153977..111172491 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041562052.1 → XP_041417986.1  alkaline ceramidase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1L8HWL4, A0A974I3F5
    Related
    ENSXLAP00005045335.1, ENSXLAT00005046434.1
    Conserved Domains (1) summary
    pfam05875
    Location:5 → 255
    Ceramidase

  2. XM_018255201.2 → XP_018110690.1  alkaline ceramidase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1L8HWL4, A0A974I3F5
    Related
    ENSXLAP00005045343.1, ENSXLAT00005046441.1
    Conserved Domains (1) summary
    pfam05875
    Location:5 → 255
    Ceramidase

  3. XM_041562047.1 → XP_041417981.1  alkaline ceramidase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8J1KKZ3
    Related
    ENSXLAP00005045337.1, ENSXLAT00005046436.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.