U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

snrnp200.S small nuclear ribonucleoprotein, U5 200kDa subunit S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108712757, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
snrnp200.S
Official Full Name
small nuclear ribonucleoprotein, U5 200kDa subunit S homeolog
Primary source
Xenbase:XB-GENE-17330761
Locus tag
XELAEV_18020311mg
See related
EnsemblRapid:ENSXLAG00005016443
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ascc3l1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3S
Exon count:
45
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (28333490..28382058)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (27176216..27224749)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene non-SMC condensin I complex subunit H S homeolog Neighboring gene nucleoporin 133kDa S homeolog Neighboring gene cytosolic iron-sulfur assembly component 1 S homeolog Neighboring gene transmembrane protein 127 S homeolog Neighboring gene StAR related lipid transfer domain containing 7 S homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables helicase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
U5 small nuclear ribonucleoprotein 200 kDa helicase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    28333490..28382058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018255156.2 → XP_018110645.1  U5 small nuclear ribonucleoprotein 200 kDa helicase

    UniProtKB/TrEMBL
    A0A1L8GS40, A0A974DDA9, A0A974HQJ1
    Related
    ENSXLAP00005048968.1, ENSXLAT00005050105.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.