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atp5f1d.S ATP synthase F1 subunit delta S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108706842, updated on 11-Apr-2024

Summary

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Official Symbol
atp5f1d.S
Official Full Name
ATP synthase F1 subunit delta S homeolog
Primary source
Xenbase:XB-GENE-17339443
Locus tag
XELAEV_18009771mg
See related
EnsemblRapid:ENSXLAG00005034186
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
atp5d; atp5d.S
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Genomic context

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See atp5f1d.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (90560905..90564490, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (85307799..85311396, complement)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene cold inducible RNA binding protein S homeolog Neighboring gene midnolin S homeolog Neighboring gene CACN subunit beta associated regulatory protein S homeolog Neighboring gene serine/threonine kinase 11 S homeolog Neighboring gene uncharacterized LOC121399367

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables proton-transporting ATP synthase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
part_of mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
part_of proton-transporting ATP synthase complex, catalytic core F(1) IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ATP synthase subunit delta, mitochondrial
Names
ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    90560905..90564490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018243604.2 → XP_018099093.1  ATP synthase subunit delta, mitochondrial

    UniProtKB/TrEMBL
    A0A1L8HN67, A0A974DT90, A0A974DYX8
    Related
    ENSXLAP00005102097.1, ENSXLAT00005104088.1
Nucleotide Protein Strain
Heading Accession and Version

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