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pxylp1 2-phosphoxylose phosphatase 1 [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108277776, updated on 14-Mar-2024

Summary

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Gene symbol
pxylp1
Gene description
2-phosphoxylose phosphatase 1
See related
Ensembl:ENSIPUG00000018814
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
acpl2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 17 NC_030432.2 (18941323..18955944, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 17 NC_030432.1 (7295203..7309795)

Chromosome 17 - NC_030432.2Genomic Context describing neighboring genes Neighboring gene NACHT, LRR and PYD domains-containing protein 3 Neighboring gene ephrin type-A receptor 4 Neighboring gene solute carrier family 25 member 36-A Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-phosphoxylose phosphatase 1
Names
Acid phosphatase-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030432.2 Reference Coco_2.0 Primary Assembly

    Range
    18941323..18955944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017490677.3 → XP_017346166.1  2-phosphoxylose phosphatase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2D0SUH3, W5UAR0
    Related
    ENSIPUP00000027775.1

  2. XM_017490678.3 → XP_017346167.1  2-phosphoxylose phosphatase 1 isoform X2

    UniProtKB/TrEMBL
    A0A2D0STZ6, W5UAR0
    Related
    ENSIPUP00000027854.1
Nucleotide Protein
Heading Accession and Version

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