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si:dkey-248g21.1 si:dkey-248g21.1 [ Danio rerio (zebrafish) ]

Gene ID: 108182845, updated on 25-Jan-2022

Summary

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Official Symbol
si:dkey-248g21.1provided by ZNC
Official Full Name
si:dkey-248g21.1provided by ZNC
Primary source
ZFIN:ZDB-GENE-131119-67
See related
AllianceGenome:ZFIN:ZDB-GENE-131119-67
Gene type
ncRNA
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (46635432..46636776)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (48682392..48685143)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene ribonucleoprotein, PTB-binding 1 Neighboring gene uncharacterized LOC100001908 Neighboring gene phosphodiesterase 4A, cAMP-specific Neighboring gene PRKCSH beta subunit of glucosidase II Neighboring gene ELAV like neuron-specific RNA binding protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    46635432..46636776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001798026.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version