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LOC107502060 DNA dC->dU-editing enzyme APOBEC-3G [ Rousettus aegyptiacus (Egyptian rousette) ]

Gene ID: 107502060, updated on 2-May-2024

Summary

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Gene symbol
LOC107502060
Gene description
DNA dC->dU-editing enzyme APOBEC-3G
Locus tag
HJG63_000835
Gene type
protein coding
RefSeq status
MODEL
Organism
Rousettus aegyptiacus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Rousettinae; Rousettus
Also known as
APOBEC3F; APOBEC3H
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current mRouAeg1.p (GCF_014176215.1) Unplaced Scaffold NW_023416295.1 (170624230..170631255)
100 previous assembly Raegyp2.0 (GCF_001466805.2) Unplaced Scaffold NW_015495138.1 (196768..228320, complement)

NW_023416295.1Genomic Context describing neighboring genes Neighboring gene DNA dC->dU-editing enzyme APOBEC-3A Neighboring gene DNA dC->dU-editing enzyme APOBEC-3C-like Neighboring gene chromobox 7 Neighboring gene transfer RNA alanine (anticodon CGC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytidine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA cytosine deamination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytidine to uridine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of single stranded viral RNA replication via double stranded DNA intermediate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA dC->dU-editing enzyme APOBEC-3G; DNA dC->dU-editing enzyme APOBEC3
Names
apolipoprotein B mRNA editing enzyme catalytic subunit 3F
apolipoprotein B mRNA editing enzyme catalytic subunit 3H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rousettus aegyptiacus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRouAeg1.p

Genomic

  1. NW_023416295.1 Reference mRouAeg1.p

    Range
    170624230..170631255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036237508.1 → XP_036093401.1  DNA dC->dU-editing enzyme APOBEC3 isoform X1

    UniProtKB/TrEMBL
    A0A7J8J9M9
    Conserved Domains (1) summary
    pfam18772
    Location:25 → 199
    APOBEC2

  2. XM_036237509.1 → XP_036093402.1  DNA dC->dU-editing enzyme APOBEC-3G isoform X2

    UniProtKB/TrEMBL
    A0A7J8J9M9
    Conserved Domains (1) summary
    pfam18772
    Location:25 → 198
    APOBEC2
Nucleotide Protein
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