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atf7ip2 activating transcription factor 7 interacting protein 2 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107390556, updated on 14-Mar-2024

Summary

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Gene symbol
atf7ip2
Gene description
activating transcription factor 7 interacting protein 2
See related
Ensembl:ENSNFUG00015014077
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539927.1 (45093547..45108809)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr15 NC_029663.1 (1767819..1782535)

NW_026539927.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene epithelial membrane protein 2 Neighboring gene NLR family CARD domain-containing protein 3 Neighboring gene uncharacterized LOC129166875

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA methylation-dependent heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein atf7ip2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539927.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    45093547..45108809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015967354.2 → XP_015822840.2  uncharacterized protein atf7ip2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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