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abcc12 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107381982, updated on 14-Mar-2024

Summary

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Gene symbol
abcc12
Gene description
ATP-binding cassette, sub-family C (CFTR/MRP), member 12
See related
Ensembl:ENSNFUG00015013663
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539934.1 (58819202..58863168)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr07 NC_029655.1 (58075010..58120690)

NW_026539934.1Genomic Context describing neighboring genes Neighboring gene rhophilin, Rho GTPase binding protein 2 Neighboring gene centrosomal protein 89 Neighboring gene uncharacterized LOC107381985 Neighboring gene uncharacterized LOC129153251 Neighboring gene myocyte-specific enhancer factor 2A Neighboring gene uncharacterized LOC129153252

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family C member 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539934.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    58819202..58863168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015953927.2 → XP_015809413.2  ATP-binding cassette sub-family C member 12 isoform X1

  2. XM_054732571.1 → XP_054588546.1  ATP-binding cassette sub-family C member 12 isoform X2

  3. XM_054732570.1 → XP_054588545.1  ATP-binding cassette sub-family C member 12 isoform X1

  4. XM_015953928.2 → XP_015809414.2  ATP-binding cassette sub-family C member 12 isoform X1

  5. XM_054732572.1 → XP_054588547.1  ATP-binding cassette sub-family C member 12 isoform X3

  6. XM_054732573.1 → XP_054588548.1  ATP-binding cassette sub-family C member 12 isoform X4

  7. XM_054732574.1 → XP_054588549.1  ATP-binding cassette sub-family C member 12 isoform X5

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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