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LOC107078906 zona pellucida sperm-binding protein 1-like [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 107078906, updated on 2-Nov-2023

Summary

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Gene symbol
LOC107078906
Gene description
zona pellucida sperm-binding protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
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Genomic context

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See LOC107078906 in Genome Data Viewer
Location:
chromosome: LG12
Exon count:
10
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG12 NC_023190.1 (36364138..36367691)

Linkage Group LG12 - NC_023190.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107078909 Neighboring gene matrix Gla protein Neighboring gene protein enabled homolog Neighboring gene mucin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023190.1 Chromosome LG12 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acrosin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of egg coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in binding of sperm to zona pellucida IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in prevention of polyspermy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in egg coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zona pellucida sperm-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023190.1 Reference LepOcu1 Primary Assembly

    Range
    36364138..36367691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015359708.1 → XP_015215194.1  zona pellucida sperm-binding protein 1-like

    Conserved Domains (3) summary
    smart00018
    Location:147 → 187
    PD; P or trefoil or TFF domain
    smart00241
    Location:188 → 445
    ZP; Zona pellucida (ZP) domain
    pfam00100
    Location:317 → 445
    Zona_pellucida; Zona pellucida-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases