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si:dkey-122a22.2 uncharacterized LOC107078705 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 107078705, updated on 14-Mar-2024

Summary

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Gene symbol
si:dkey-122a22.2
Gene description
uncharacterized LOC107078705
See related
Ensembl:ENSLOCG00000009416
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
zebrafish all
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Genomic context

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See si:dkey-122a22.2 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
13
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG11 NC_023189.1 (31350787..31386953)

Linkage Group LG11 - NC_023189.1Genomic Context describing neighboring genes Neighboring gene squalene epoxidase a Neighboring gene oxidation resistance 1a Neighboring gene zinc finger protein, FOG family member 2a Neighboring gene low density lipoprotein receptor-related protein 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023189.1 Chromosome LG11 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC107078705

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023189.1 Reference LepOcu1 Primary Assembly

    Range
    31350787..31386953
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015358132.1 → XP_015213618.1  uncharacterized protein LOC107078705 isoform X2

    Conserved Domains (1) summary
    COG0596
    Location:64 → 364
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

  2. XM_015358133.1 → XP_015213619.1  uncharacterized protein LOC107078705 isoform X3

    Conserved Domains (1) summary
    COG0596
    Location:63 → 363
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

  3. XM_015358134.1 → XP_015213620.1  uncharacterized protein LOC107078705 isoform X4

    Conserved Domains (1) summary
    COG0596
    Location:76 → 195
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]

  4. XM_015358131.1 → XP_015213617.1  uncharacterized protein LOC107078705 isoform X1

    UniProtKB/TrEMBL
    W5MSY0
    Related
    ENSLOCP00000011489.1, ENSLOCT00000011506.1
    Conserved Domains (1) summary
    COG0596
    Location:76 → 376
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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