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atp5l ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g [ Salmo salar (Atlantic salmon) ]

Gene ID: 106602876, updated on 13-Mar-2024

Summary

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Gene symbol
atp5l
Gene description
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g
See related
Ensembl:ENSSSAG00000046603
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: ssa04
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa04 NC_059445.1 (33767220..33770157, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa04 NC_027303.1 (28568951..28571762, complement)

Chromosome ssa04 - NC_059445.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106602878 Neighboring gene intraflagellar transport 22 homolog (Chlamydomonas) Neighboring gene NHERF family PDZ scaffold protein 4b Neighboring gene ATP-binding cassette, sub-family G (WHITE), member 4a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Extensive local gene duplication and functional divergence among paralogs in Atlantic salmon. Warren IA, et al. Genome Biol Evol, 2014 Jun 19. PMID 24951567, Free PMC Article
  2. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase subunit g, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059445.1 Reference Ssal_v3.1

    Range
    33767220..33770157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014195834.2 → XP_014051309.1  ATP synthase subunit g, mitochondrial

    UniProtKB/TrEMBL
    B5XF93, M4UZU2
    Related
    ENSSSAP00000044488.1, ENSSSAT00000071230.2
    Conserved Domains (1) summary
    pfam04718
    Location:10 → 101
    ATP-synt_G; Mitochondrial ATP synthase g subunit
Nucleotide Protein
Heading Accession and Version

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