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RNU7-107P RNA, U7 small nuclear 107 pseudogene [ Homo sapiens (human) ]

Gene ID: 106479067, updated on 10-Oct-2023

Summary

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Official Symbol
RNU7-107Pprovided by HGNC
Official Full Name
RNA, U7 small nuclear 107 pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:45641
See related
Ensembl:ENSG00000238523 AllianceGenome:HGNC:45641
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
10q11.23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (50590652..50590712, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (51439257..51439317, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (52350412..52350472, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene dynein cytoplasmic 1 intermediate chain 2 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:52072847-52073346 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3358 Neighboring gene sphingomyelin synthase 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:52115322-52115522 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3359 Neighboring gene NANOG hESC enhancer GRCh37_chr10:52150757-52151283 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:52166919-52167712 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr10:52169740-52170240 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2367 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3360 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3361 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3362 Neighboring gene Sharpr-MPRA regulatory region 10759 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3363 Neighboring gene Sharpr-MPRA regulatory region 12597 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3364 Neighboring gene uncharacterized LOC124902424 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2368 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3365 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3366 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2369 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:52383585-52384113 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2371 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3367 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3368 Neighboring gene SGMS1 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3369 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3370 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3371 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3373 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3372 Neighboring gene SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1 Neighboring gene BEN domain containing 3 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045921.1 

    Range
    101..161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    50590652..50590712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    51439257..51439317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases