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APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C [ Mandrillus leucophaeus (drill) ]

Gene ID: 105538863, updated on 13-Mar-2024

Summary

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Gene symbol
APOBEC3C
Gene description
apolipoprotein B mRNA editing enzyme catalytic subunit 3C
See related
Ensembl:ENSMLEG00000036992
Gene type
protein coding
RefSeq status
MODEL
Organism
Mandrillus leucophaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Mandrillus
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Mleu.le_1.0 (GCF_000951045.1) Unplaced Scaffold NW_012102031.1 (3994325..4000409, complement)

NW_012102031.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein B mRNA editing enzyme catalytic subunit 3F Neighboring gene DNA dC->dU-editing enzyme APOBEC-3C-like Neighboring gene uncharacterized LOC105538865 Neighboring gene apolipoprotein B mRNA editing enzyme catalytic subunit 3B Neighboring gene neuronal pentraxin receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012102031.1 Unplaced Scaffold Reference Mleu.le_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytidine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deoxycytidine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA cytosine deamination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytidine to uridine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of single stranded viral RNA replication via double stranded DNA intermediate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA dC->dU-editing enzyme APOBEC-3C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mandrillus leucophaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mleu.le_1.0

Genomic

  1. NW_012102031.1 Reference Mleu.le_1.0

    Range
    3994325..4000409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011978845.1 → XP_011834235.1  DNA dC->dU-editing enzyme APOBEC-3C

    UniProtKB/TrEMBL
    A0A2K5ZCR2
    Related
    ENSMLEP00000025602.1, ENSMLET00000049136.1
    Conserved Domains (3) summary
    cd01283
    Location:8 → 158
    cytidine_deaminase; Cytidine deaminase zinc-binding domain. These enzymes are Zn dependent. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a water molecule to form a hydroxide ion that performs a nucleophilic attack on ...
    pfam05240
    Location:129 → 174
    APOBEC_C; APOBEC-like C-terminal domain
    pfam08210
    Location:17 → 187
    APOBEC_N; APOBEC-like N-terminal domain
Nucleotide Protein
Heading Accession and Version

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