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LOC105375794 uncharacterized LOC105375794 [ Homo sapiens (human) ]

Gene ID: 105375794, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105375794
Gene description
uncharacterized LOC105375794
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in adrenal (RPKM 1.6) and testis (RPKM 0.6) See more
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Genomic context

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See LOC105375794 in Genome Data Viewer
Location:
8q24.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (142925293..142927173)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (144068615..144070495)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene CYP11B1 recombination region Neighboring gene CYP11B1 promoter Neighboring gene cytochrome P450 family 11 subfamily B member 1 Neighboring gene CYP11B2 recombination region Neighboring gene CYP11B2 promoter Neighboring gene cytochrome P450 family 11 subfamily B member 2 Neighboring gene Sharpr-MPRA regulatory region 5092 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:144033761-144034332 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:144063636-144063766 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:144070153-144070654 Neighboring gene LY6E divergent transcript Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:144073720-144074227 Neighboring gene CDC42 pseudogene 3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:144089139-144089952 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:144089953-144090765 Neighboring gene lymphocyte antigen 6 family member E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    142925293..142927173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_928730.1 RNA Sequence

  2. XR_001745744.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    144068615..144070495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079497.1 RNA Sequence

  2. XR_007079498.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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