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LOC105371723 uncharacterized LOC105371723 [ Homo sapiens (human) ]

Gene ID: 105371723, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105371723
Gene description
uncharacterized LOC105371723
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
17q11.2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (30647044..30705465)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (31591702..31609268)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene Neighboring gene NF1-REPa UWA160-1 recombination region Neighboring gene leucine rich repeat containing 37B pseudogene Neighboring gene SH3 domain containing GRB2 like 1, endophilin A2 pseudogene 2 Neighboring gene leucine rich repeat containing 37B pseudogene 1 Neighboring gene Sharpr-MPRA regulatory region 474 Neighboring gene NF1-REPa PRS1 recombination region Neighboring gene NF1-REPa PRS2 recombination region Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:28993682-28994231 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:28994232-28994780 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:28994781-28995330 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29026421-29027394 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:29027395-29028368 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12000 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:29036042-29036718 Neighboring gene RNA, 7SL, cytoplasmic 316, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12001 Neighboring gene SUZ12 pseudogene 1 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29058617-29059237 Neighboring gene SUZ12P1 PRS4 recombination region Neighboring gene cytokine receptor like factor 3 Neighboring gene Sharpr-MPRA regulatory region 4018 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:29157944-29158579 Neighboring gene ribosomal protein S17 pseudogene 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    30647044..30705465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001753096.2 RNA Sequence

  2. XR_001753095.2 RNA Sequence

  3. XR_007065703.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    31591702..31609268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087364.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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