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LOC105265985 agrin-like [ Fopius arisanus ]

Gene ID: 105265985, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105265985
Gene description
agrin-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Fopius arisanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Opiinae; Fopius
Also known as
Agrin; Agrn_1
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Genomic context

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Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current ASM80636v1 (GCF_000806365.1) Unplaced Scaffold NW_011887741.1 (408295..627936)

NW_011887741.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105265886 Neighboring gene glycine--tRNA ligase Neighboring gene lipase member I-like Neighboring gene speckle-type POZ protein-like Neighboring gene speckle-type POZ protein-like Neighboring gene speckle-type POZ protein B-like Neighboring gene histone H2B.1, embryonic-like Neighboring gene actin-binding Rho-activating protein-like Neighboring gene elongation factor 1-alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011887741.1 Unplaced Scaffold Reference ASM80636v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
agrin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fopius arisanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80636v1

Genomic

  1. NW_011887741.1 Reference ASM80636v1

    Range
    408295..627936
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011303875.1 → XP_011302177.1  agrin-like isoform X5

    UniProtKB/TrEMBL
    A0A0C9RSR6, A0A9R1T3C0
    Conserved Domains (7) summary
    smart00280
    Location:209 → 254
    KAZAL; Kazal type serine protease inhibitors
    cd00054
    Location:1770 → 1802
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:882 → 930
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:434 → 474
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cd00110
    Location:1594 → 1744
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:935 → 970
    Laminin_EGF; Laminin EGF domain
    cl00097
    Location:621 → 690
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

  2. XM_011303885.1 → XP_011302187.1  agrin-like isoform X6

    UniProtKB/TrEMBL
    A0A0C9RSR6, A0A9R1U002
    Conserved Domains (7) summary
    smart00280
    Location:198 → 243
    KAZAL; Kazal type serine protease inhibitors
    cd00054
    Location:1759 → 1791
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:871 → 919
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:423 → 463
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cd00110
    Location:1583 → 1733
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:924 → 959
    Laminin_EGF; Laminin EGF domain
    cl00097
    Location:610 → 679
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

  3. XM_011303849.1 → XP_011302151.1  agrin-like isoform X1

    UniProtKB/TrEMBL
    A0A9R1T3R0
    Conserved Domains (7) summary
    smart00280
    Location:505 → 550
    KAZAL; Kazal type serine protease inhibitors
    cd00054
    Location:2066 → 2098
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:1178 → 1226
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:730 → 770
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cd00110
    Location:1890 → 2040
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:1231 → 1266
    Laminin_EGF; Laminin EGF domain
    cl00097
    Location:917 → 986
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

  4. XM_011303856.1 → XP_011302158.1  agrin-like isoform X2

    UniProtKB/TrEMBL
    A0A9R1T3K6
    Conserved Domains (7) summary
    smart00280
    Location:505 → 550
    KAZAL; Kazal type serine protease inhibitors
    cd00054
    Location:2066 → 2098
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:1178 → 1226
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:730 → 770
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cd00110
    Location:1890 → 2040
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:1231 → 1266
    Laminin_EGF; Laminin EGF domain
    cl00097
    Location:917 → 986
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

  5. XM_011303860.1 → XP_011302162.1  agrin-like isoform X3

    UniProtKB/TrEMBL
    A0A9R1T3B2
    Conserved Domains (7) summary
    smart00280
    Location:505 → 550
    KAZAL; Kazal type serine protease inhibitors
    cd00054
    Location:1986 → 2018
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:1178 → 1226
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:730 → 770
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cd00110
    Location:1810 → 1960
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:1231 → 1266
    Laminin_EGF; Laminin EGF domain
    cl00097
    Location:917 → 986
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...

  6. XM_011303868.1 → XP_011302170.1  agrin-like isoform X4

    UniProtKB/TrEMBL
    A0A9R1T3N0
    Conserved Domains (7) summary
    smart00280
    Location:505 → 550
    KAZAL; Kazal type serine protease inhibitors
    cd00054
    Location:1967 → 1999
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00055
    Location:1079 → 1127
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00104
    Location:730 → 770
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
    cd00110
    Location:1791 → 1941
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:1132 → 1167
    Laminin_EGF; Laminin EGF domain
    cl00097
    Location:917 → 986
    KAZAL_FS; Kazal type serine protease inhibitors and follistatin-like domains. Kazal inhibitors inhibit serine proteases, such as, trypsin, chyomotrypsin, avian ovomucoids, and elastases. The inhibitory domain has one reactive site peptide bond, which serves the ...
Nucleotide Protein
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