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Gm41394 predicted gene, 41394 [ Mus musculus (house mouse) ]

Gene ID: 105246032, updated on 8-Feb-2024

Summary

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Official Symbol
Gm41394provided by MGI
Official Full Name
predicted gene, 41394provided by MGI
Primary source
MGI:MGI:5624279
See related
AllianceGenome:MGI:5624279
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 4.8) See more
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Genomic context

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See Gm41394 in Genome Data Viewer
Location:
15 F1; 15
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (97509091..97518155, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (97611210..97620274, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene PC-esterase domain containing 1B Neighboring gene STARR-positive B cell enhancer ABC_E8610 Neighboring gene STARR-positive B cell enhancer ABC_E9920 Neighboring gene STARR-positive B cell enhancer ABC_E7414 Neighboring gene predicted gene, 33325 Neighboring gene STARR-positive B cell enhancer ABC_E1484 Neighboring gene STARR-seq mESC enhancer starr_39625 Neighboring gene STARR-seq mESC enhancer starr_39629 Neighboring gene predicted gene, 41393 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:97289192-97289405 Neighboring gene STARR-seq mESC enhancer starr_39631 Neighboring gene STARR-seq mESC enhancer starr_39632 Neighboring gene STARR-seq mESC enhancer starr_39633 Neighboring gene STARR-seq mESC enhancer starr_39634 Neighboring gene STARR-positive B cell enhancer ABC_E10876 Neighboring gene STARR-positive B cell enhancer ABC_E7415 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:97551732-97551973 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:97561501-97561858 Neighboring gene RNA polymerase II associated protein 3 Neighboring gene endonuclease, polyU-specific

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    97509091..97518155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_875642.2 RNA Sequence

  2. XR_001781757.1 RNA Sequence

  3. XR_001781756.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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