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Gm40402 predicted gene, 40402 [ Mus musculus (house mouse) ]

Gene ID: 105244871, updated on 8-Feb-2024

Summary

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Official Symbol
Gm40402provided by MGI
Official Full Name
predicted gene, 40402provided by MGI
Primary source
MGI:MGI:5623287
See related
AllianceGenome:MGI:5623287
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 7.9) See more
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Genomic context

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Location:
6 F3; 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (127756159..127791271)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (127779196..127814308)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene protein arginine N-methyltransferase 8 Neighboring gene predicted gene, 38900 Neighboring gene STARR-seq mESC enhancer starr_17419 Neighboring gene RIKEN cDNA 4921513H07 gene Neighboring gene STARR-seq mESC enhancer starr_17420 Neighboring gene microRNA 7233 Neighboring gene predicted gene, 38901 Neighboring gene STARR-seq mESC enhancer starr_17422 Neighboring gene STARR-seq mESC enhancer starr_17423 Neighboring gene predicted gene, 46976 Neighboring gene predicted gene, 40401

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    127756159..127791271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001785370.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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