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Gm40079 predicted gene, 40079 [ Mus musculus (house mouse) ]

Gene ID: 105244478, updated on 8-Feb-2024

Summary

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Official Symbol
Gm40079provided by MGI
Official Full Name
predicted gene, 40079provided by MGI
Primary source
MGI:MGI:5622964
See related
AllianceGenome:MGI:5622964
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
3 F1; 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (84652301..84699519)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (84744994..84792206)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 46836 Neighboring gene STARR-seq mESC enhancer starr_08087 Neighboring gene STARR-seq mESC enhancer starr_08088 Neighboring gene STARR-positive B cell enhancer mm9_chr3:84457727-84458028 Neighboring gene STARR-positive B cell enhancer ABC_E1263 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:84485598-84485953 Neighboring gene transmembrane protein 154 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:84535918-84536119 Neighboring gene STARR-positive B cell enhancer ABC_E2072 Neighboring gene STARR-seq mESC enhancer starr_08092 Neighboring gene STARR-positive B cell enhancer ABC_E11196 Neighboring gene predicted gene, 35486 Neighboring gene F-box and WD-40 domain protein 7 Neighboring gene predicted gene, 40080

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    84652301..84699519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_867395.3 RNA Sequence

  2. XR_867394.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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